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Other Projects

Wan, W.-L., Kim, G., Kim, N., Tan, Y.Y., Machiko, W, Charoennit, N., Lee, R.R.Q., Kai, I.P.R., Wang J., Lieu, Y.Y., Hu, D., Ng, S.K., Zhang, Y., Jang, I.-C., Song, J.J.*, Chae, E.*. Structure determinants of DANGEROUS MIX 3, an alpha/beta hydrolase, for triggering NLR-mediated genetic incompatibility in plants. Molecular Cell (2025) (*Co-corresponding authors)

 

Yang, H.W., Song, J.Y., Song, J.J., Kim, Y.W., Rockwell, R., Kim, W., Kim, H., Lagarias, C.L., Park, Y.I. Dual-Cys bacteriophytochromes: intermediates in cyanobacterial phytochrome evolution? FEBS Journal (2025).​​

 

Kim, Y., Lee, S., Yoon, J., Shin, Y., Kang, S., Kim, S.Y., Woo, S., Song, J.J. *,Jon, S*. Neoantigen_displaying Protein Nanoparticles as a Therapuetic Cancer Vaccine Against Melanoma. Adv. Healthc. Mater. (2024) (*Co-corresponding authors)

 

Hong, S., Kim, K., Shim, Y.R., Park, J., Choi, S.E., Min, H., Lee, S., Song, J.J., Kang, S.J., Jeong, W.I., Seong, R.H., Kim, S. A non-catalytic role of IPMK is required for PLCγ1 activation in T cell receptor signaling by stabilizing the PLCγ1-Sam68 complex. Cell Commun. Signal. (2024)

 

Choi S, Lee Y, Park S, Jang SY, Park J, Oh DW, Kim SM, Kim TH, Lee GS, Cho C, Kim BS, Lee D, Kim EH, Cheong HK, Moon JH, Song JJ, Hwang J, Kim MH., Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet. Nature Communications (2024).

Shin, M., Chang, E., Lee, D., Kim, N., Cho, B., Cha, N., Koranteng, F., Song, J.J., Shim, J., Drosophila immune cells transport oxygen through PPO2 protein phase transition. Nature (2024).

 

Kim, K.J., Kim, G., Bae, J.H., Song, J.J., Kim, H.S., A pH-Responsive Virus-Like Particle as a Protein Cage for a Targeted Delivery. Advanced Heathcare Materials (2024).

 

Shin, S., Han, S., Kim, J., Shin,  Y., Song, J.J., Hohng, S., Fast, sensitive and specific multiplexed single-molecule detection of circulating tumor DNA. Biosensors and Bioelectronics (2023)

 

Kim, H.S., Bae, J.H, Kim, G., Song, J.J., Kim, H.S., Construction and Functionalization of a Clathrin Assembly for a Targeted Protein Delivery. Small (2023).

 

Yu, T.G., Cha, J.S., Kim, G., Sohn, Y.K., Yoo, Y., Kim, U., Song, J.J., Cho, H.S., Kim. H.S., Oligomeric states of ASC specks regulate inflammatory responses by inflammasome in the extracellular space. Cell Death Discov. (2023).

 

Kim, Y., Park, H., Kim, Y., Kim, S.H., Lee, J.H., Yang, H., Kim, S.J., Li, C.M., Lee, H., Na, D.H., Moon, S., Shin, Y., Kam, T.I., Lee, H.W., Kim, S., Song, J.J., Jung, Y.K., Pathogenic Role of RAGE in Tau Transmission and Memory Deficits. Biol. Psychiatry (2023).

 

Heo, Y., Yoon, E., Jeon, Y.-E., Yun, J.-H., Ishimoto, N., Woo, H., Park, S.-Y., *Song, J.J., *Lee, W., Cryo-EM structure of the human somatostatin receptor 2 complex with its agonist somatostatin delineates the ligand binding specificity. eLife (2022) (*Co-corresponding authors)

Kim, H.S., Bae, J.H., Kim, G., Song, J.J., Kim, H.S., Construction and Functionalization of a Clathrin Assembly for a Targeted Protein Delivery. Small (2022).

Kang, S., Kim, Y., Shin, Y., *Song, J.J., *Jon, S., Antigen-Presenting, Self-Assembled Protein Nanobarrels as an Adjuvant-Free Vaccine Platform against Influenza Virus. ACS Nano (2021). (*Co-corresponding authors)

Cho, S., Kim, G., *Song, J.J., *Cho, C., Cryo-EM Structure of Vibrio cholerae aldehyde-alcohol dehydrogenase spirosomes. Biochem Biophys Res Commun. (2021) (*Co-corresponding authors)

 

Bae, J.-H., Kim, H.-S., Kim, G., Song, J.J., Kim, H.-S., Dendrimer-Like Supramolecular Assembly of Proteins with a Tunable Size and Valency Through Stepwise Iterative Growth. Advanced Science (2021)

 

Kim, G., Jang, S., Lee, E., Song, J.J., EMPAS: Electron Microcopy Screening for Endogenous Protein Architecture. Molecules & Cells (2020)

 

Kim, G.J, Yang, J.S., Jang, J.W., Choi, J.-S., Roe, A., Byron, O.,Seok, C., Song, J.J., Aldehyde-alcohol dehydrogenase undergoes structural transition to form extended spirosome for substrate channeling. Communications Biology (2020)

Lee, B., Park, S.J., Lee S., Park, S.E., Lee, E., Song, J.J., Byun Y., Kim, S., Identification of the antidepressant vilazodone asan inhibitor of inositol polyphosphate multikinase by structure-based drug repositioning. Molecules & Cells (2020)

 

Song, J., Lee, H.Y., Yang, H.W., Song J.J., Lagarias, J.C., Park, Y.-I., Spectral and photochenimcal diversity of tandem cysteine cynobacterial phytochronmes. Journal of Biological Chemistry (2020).

Lee, Y., Lim B., Lee, S.W., Lee. W.R., Kim, Y.I., Kim, M., Ju, H., Kim, M.Y., Kang, S.J., Song, J.J.*, Lee, E.*, Kang, C.*, ANKRD9 is associated with tumor suppression as a substrate receptor subunit of ubiquitin ligase. BBA-Molecular Basis of Disease (2018)*co-corresponding authors

 

Shin, M., Lee, H.A., Lee, M., Shin, Y., Song, J.J.,Kang, S.W., Nam, D.H., Jeon, E.J., Cho, M., Do, M.J., Park, S.H., Lee, M.S., Jang, J.H., Cho, S.W., Kim, K.S., Lee, H., TANNylation: Heart-targeting Protein Modification Strategy., Nature Biomedical Engineering (2018)

Cho, S.M., Jeoung, S.C.,  Song, J.-Y., Song, J.J., Park, YI., Hydrophobic Residues near the Bilin Chromophore-Binding Pocket Modulate Spectral Tuning of Insert-Cys Subfamily Cyanobacteriochromes., Scientific Reports (2017)

 

Hyun, K., Lee, Y., Yoon, J., Yi H., Song, J.J., Crystal structure of Arabidopsis thaliana SNC1 TIR domain., Biochemical and Biophysical Research Communication (2016)

Park S, Shin Y.M., Seo, J., Song, J.J., Yang, H.S., Highly sensitive and simply operated protease sensor toward point-of-care testing. Analyst (2016) (*co-corresponding authors)

Hyun, S.H., Park, D.K., Kang, A., Kim, S., Kim, D., Shin, Y.M., Song, J.J., Yun, W.S., Label-free electrochemical detection of botulinum neurotoxin type E based on its enzymatic activity using interdigitated electrodes. Applied Physics Letters (2016)

 

Cho, S.M., Jeoung, S.C., Kupriyanova, E.V., Pronina N.A., Lee, B.W., Jo., S.W., Park, B.S., Choi, S., Song, J.J., Park, Y.I., Genomic survey and biochemical analysis of recombinant candidate cyanobacteriochromes reveals enrichment for near UV/Violet sensors in the halotolerant and alkaliphilic cyanobacterium Microcoleus IPPAS B353. J. Biol. Chem. (2015)

 

Kim, D.G., Park, J., Kim, S.J., Soh, Y.-M., Kim, H.M., Oh, B.-H., Song, J.J., Brucella Immunogenic BP26 forms a Channel-like Structure. J. Mol. Biol. (2013) Cover Article

 

Lee, J.H, Jung, S.C., Bui, L.M., Kang, K.H., Song, J.J., Kim, S.C.,  Improved production of L-threonine using a DNA scaffold system in Escherichia coli. Appl. Environ. Microbiol. (2012)

 

Song, J. J., Kim, M. K., Hur, E., Park, H., Eom, S. H., Crystallization and preliminary X-ray crystallographic analysis of bHLH domain of Aryl Hydrocarbon Receptor Nucleus Translocator, Prot. Pep. Lett. 8, 419-422(2001).

 

Wang, J., Song, J. J., Seong, I. S., Franklin, M. C., Kamtekar, S., Eom, S. H., Chung, C. H., Nucleotide-dependent conformational changes in a protease-associated ATPase HslU, Structure 9, 1107-1116(2001).

 

Wang, J., Song, J. J., Franklin, M. C., Kamtekar, S., Im, Y. J., Rho, S. H., Seong, I. S., Lee, C. S., Chung, C. H., Eom, S. H., Crystal structures of the HslVU peptidase-ATPase complex reveal an ATP-dependent proteolysis mechanism, Structure 9, 177-84(2001).

 

Song, J. J., Lee, C. S., Kim, Y. S., Kim, J. J., Im, Y. J., Kim, H. H., Yoo, S. J., Seong, I. S., Chung, C. H., and Eom, S. H., Crystallization and preliminary X-ray crystallographic studies of HslU mutant in Escherichia coli, Bull. Korean Chem. Soc. 21, 747-748(2000).

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